Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Cldn20G5E8X0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.71■□□□□ 0.43
Cldn20G5E8X0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cldn20G5E8X0 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cldn20G5E8X0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cldn20G5E8X0 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cldn20G5E8X0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cldn20G5E8X0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Cldn20G5E8X0 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn20G5E8X0 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.69■□□□□ 0.42
Cldn20G5E8X0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn20G5E8X0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cldn20G5E8X0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cldn20G5E8X0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Cldn20G5E8X0 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cldn20G5E8X0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cldn20G5E8X0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cldn20G5E8X0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.65■□□□□ 0.42
Cldn20G5E8X0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Cldn20G5E8X0 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Cldn20G5E8X0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.64■□□□□ 0.42
Cldn20G5E8X0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cldn20G5E8X0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms