Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trim55G3X8Y1 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.83■□□□□ 0.92
Trim55G3X8Y1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trim55G3X8Y1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.83■□□□□ 0.92
Trim55G3X8Y1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Trim55G3X8Y1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Trim55G3X8Y1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trim55G3X8Y1 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim55G3X8Y1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim55G3X8Y1 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim55G3X8Y1 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim55G3X8Y1 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim55G3X8Y1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
Trim55G3X8Y1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim55G3X8Y1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.78■□□□□ 0.92
Trim55G3X8Y1 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim55G3X8Y1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim55G3X8Y1 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim55G3X8Y1 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim55G3X8Y1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim55G3X8Y1 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim55G3X8Y1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.77■□□□□ 0.92
Trim55G3X8Y1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Trim55G3X8Y1 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim55G3X8Y1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Trim55G3X8Y1 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.77■□□□□ 0.91
Trim55G3X8Y1 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim55G3X8Y1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim55G3X8Y1 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Trim55G3X8Y1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trim55G3X8Y1 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Trim55G3X8Y1 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.74■□□□□ 0.91
Trim55G3X8Y1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Trim55G3X8Y1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim55G3X8Y1 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trim55G3X8Y1 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim55G3X8Y1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim55G3X8Y1 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim55G3X8Y1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim55G3X8Y1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim55G3X8Y1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.73■□□□□ 0.91
Trim55G3X8Y1 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trim55G3X8Y1 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trim55G3X8Y1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms