Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Pcdh1F7BJK1 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Pcdh1F7BJK1 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh1F7BJK1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh1F7BJK1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Pcdh1F7BJK1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Gm12366-201ENSMUST00000121722 873 ntBASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Gm5786-201ENSMUST00000085368 882 ntBASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Pcdh1F7BJK1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Pcdh1F7BJK1 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pcdh1F7BJK1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh1F7BJK1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh1F7BJK1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh1F7BJK1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.36■□□□□ 0.53
Pcdh1F7BJK1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pcdh1F7BJK1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh1F7BJK1 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pcdh1F7BJK1 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Pcdh1F7BJK1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdh1F7BJK1 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh1F7BJK1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh1F7BJK1 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdh1F7BJK1 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdh1F7BJK1 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh1F7BJK1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh1F7BJK1 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh1F7BJK1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdh1F7BJK1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdh1F7BJK1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdh1F7BJK1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms