Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TprF6ZDS4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TprF6ZDS4 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.83■□□□□ 0.6
TprF6ZDS4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.82■□□□□ 0.6
TprF6ZDS4 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.82■□□□□ 0.6
TprF6ZDS4 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.82■□□□□ 0.6
TprF6ZDS4 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.82■□□□□ 0.6
TprF6ZDS4 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TprF6ZDS4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TprF6ZDS4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TprF6ZDS4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
TprF6ZDS4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.82■□□□□ 0.6
TprF6ZDS4 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TprF6ZDS4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TprF6ZDS4 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.81■□□□□ 0.6
TprF6ZDS4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TprF6ZDS4 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TprF6ZDS4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TprF6ZDS4 Gm22240-201ENSMUST00000175225 82 ntBASIC18.81■□□□□ 0.6
TprF6ZDS4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TprF6ZDS4 Gm7143-201ENSMUST00000222811 859 ntBASIC18.81■□□□□ 0.6
TprF6ZDS4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TprF6ZDS4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
TprF6ZDS4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TprF6ZDS4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TprF6ZDS4 AV356131-201ENSMUST00000206201 750 ntBASIC18.8■□□□□ 0.6
TprF6ZDS4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TprF6ZDS4 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TprF6ZDS4 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TprF6ZDS4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TprF6ZDS4 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TprF6ZDS4 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TprF6ZDS4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.79■□□□□ 0.6
TprF6ZDS4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TprF6ZDS4 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TprF6ZDS4 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TprF6ZDS4 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
TprF6ZDS4 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TprF6ZDS4 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
TprF6ZDS4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TprF6ZDS4 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.79■□□□□ 0.6
TprF6ZDS4 Gm10033-202ENSMUST00000211874 928 ntBASIC18.79■□□□□ 0.6
TprF6ZDS4 Gm10602-201ENSMUST00000098239 609 ntBASIC18.79■□□□□ 0.6
TprF6ZDS4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TprF6ZDS4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.78■□□□□ 0.6
TprF6ZDS4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
TprF6ZDS4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TprF6ZDS4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TprF6ZDS4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.78■□□□□ 0.6
TprF6ZDS4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TprF6ZDS4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
TprF6ZDS4 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TprF6ZDS4 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TprF6ZDS4 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TprF6ZDS4 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TprF6ZDS4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
TprF6ZDS4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.77■□□□□ 0.59
TprF6ZDS4 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.76■□□□□ 0.59
TprF6ZDS4 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TprF6ZDS4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TprF6ZDS4 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TprF6ZDS4 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TprF6ZDS4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TprF6ZDS4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TprF6ZDS4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
TprF6ZDS4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.75■□□□□ 0.59
TprF6ZDS4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TprF6ZDS4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TprF6ZDS4 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
TprF6ZDS4 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TprF6ZDS4 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.74■□□□□ 0.59
TprF6ZDS4 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.74■□□□□ 0.59
TprF6ZDS4 Gm43530-201ENSMUST00000195920 274 ntBASIC18.74■□□□□ 0.59
TprF6ZDS4 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.74■□□□□ 0.59
TprF6ZDS4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TprF6ZDS4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.74■□□□□ 0.59
TprF6ZDS4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TprF6ZDS4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TprF6ZDS4 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TprF6ZDS4 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TprF6ZDS4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TprF6ZDS4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
TprF6ZDS4 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TprF6ZDS4 Gm43060-201ENSMUST00000200621 289 ntBASIC18.73■□□□□ 0.59
TprF6ZDS4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TprF6ZDS4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TprF6ZDS4 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TprF6ZDS4 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
TprF6ZDS4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TprF6ZDS4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TprF6ZDS4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.73■□□□□ 0.59
TprF6ZDS4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TprF6ZDS4 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TprF6ZDS4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TprF6ZDS4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TprF6ZDS4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
TprF6ZDS4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TprF6ZDS4 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TprF6ZDS4 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.72■□□□□ 0.59
TprF6ZDS4 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms