Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Slc28a1E9PXX9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Slc28a1E9PXX9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc28a1E9PXX9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.26■□□□□ 0.67
Slc28a1E9PXX9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc28a1E9PXX9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.26■□□□□ 0.67
Slc28a1E9PXX9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc28a1E9PXX9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc28a1E9PXX9 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc28a1E9PXX9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc28a1E9PXX9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc28a1E9PXX9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.24■□□□□ 0.67
Slc28a1E9PXX9 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc28a1E9PXX9 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Slc28a1E9PXX9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Slc28a1E9PXX9 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Slc28a1E9PXX9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.21■□□□□ 0.67
Slc28a1E9PXX9 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Slc28a1E9PXX9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a1E9PXX9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a1E9PXX9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Slc28a1E9PXX9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a1E9PXX9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.19■□□□□ 0.66
Slc28a1E9PXX9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Slc28a1E9PXX9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.19■□□□□ 0.66
Slc28a1E9PXX9 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.18■□□□□ 0.66
Slc28a1E9PXX9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.17■□□□□ 0.66
Slc28a1E9PXX9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms