Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Shank1D3YZU1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Shank1D3YZU1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.33■□□□□ 0.53
Shank1D3YZU1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Shank1D3YZU1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.33■□□□□ 0.52
Shank1D3YZU1 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Shank1D3YZU1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Shank1D3YZU1 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Shank1D3YZU1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.33■□□□□ 0.52
Shank1D3YZU1 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Shank1D3YZU1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.32■□□□□ 0.52
Shank1D3YZU1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank1D3YZU1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.32■□□□□ 0.52
Shank1D3YZU1 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.32■□□□□ 0.52
Shank1D3YZU1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
Shank1D3YZU1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank1D3YZU1 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank1D3YZU1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank1D3YZU1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Shank1D3YZU1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC18.31■□□□□ 0.52
Shank1D3YZU1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank1D3YZU1 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Shank1D3YZU1 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank1D3YZU1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.31■□□□□ 0.52
Shank1D3YZU1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank1D3YZU1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank1D3YZU1 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shank1D3YZU1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shank1D3YZU1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Shank1D3YZU1 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Shank1D3YZU1 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shank1D3YZU1 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.29■□□□□ 0.52
Shank1D3YZU1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.29■□□□□ 0.52
Shank1D3YZU1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shank1D3YZU1 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.29■□□□□ 0.52
Shank1D3YZU1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.29■□□□□ 0.52
Shank1D3YZU1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC18.28■□□□□ 0.52
Shank1D3YZU1 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shank1D3YZU1 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.28■□□□□ 0.52
Shank1D3YZU1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shank1D3YZU1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shank1D3YZU1 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.27■□□□□ 0.52
Shank1D3YZU1 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shank1D3YZU1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Shank1D3YZU1 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shank1D3YZU1 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Shank1D3YZU1 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shank1D3YZU1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shank1D3YZU1 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shank1D3YZU1 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shank1D3YZU1 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Shank1D3YZU1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shank1D3YZU1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shank1D3YZU1 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shank1D3YZU1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Shank1D3YZU1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.26■□□□□ 0.51
Shank1D3YZU1 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shank1D3YZU1 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shank1D3YZU1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Shank1D3YZU1 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Shank1D3YZU1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Shank1D3YZU1 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
Shank1D3YZU1 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.25■□□□□ 0.51
Shank1D3YZU1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.25■□□□□ 0.51
Shank1D3YZU1 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Shank1D3YZU1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Shank1D3YZU1 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms