Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip3B9EHT4 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clip3B9EHT4 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.64■□□□□ 0.73
Clip3B9EHT4 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Clip3B9EHT4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.63■□□□□ 0.73
Clip3B9EHT4 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Gm13241-201ENSMUST00000094493 780 ntBASIC19.63■□□□□ 0.73
Clip3B9EHT4 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clip3B9EHT4 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clip3B9EHT4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Clip3B9EHT4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clip3B9EHT4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.61■□□□□ 0.73
Clip3B9EHT4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.61■□□□□ 0.73
Clip3B9EHT4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.61■□□□□ 0.73
Clip3B9EHT4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.61■□□□□ 0.73
Clip3B9EHT4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip3B9EHT4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip3B9EHT4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Clip3B9EHT4 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.61■□□□□ 0.73
Clip3B9EHT4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clip3B9EHT4 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip3B9EHT4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip3B9EHT4 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clip3B9EHT4 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.6■□□□□ 0.73
Clip3B9EHT4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Clip3B9EHT4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Clip3B9EHT4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clip3B9EHT4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clip3B9EHT4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Clip3B9EHT4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.58■□□□□ 0.72
Clip3B9EHT4 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Clip3B9EHT4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clip3B9EHT4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clip3B9EHT4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clip3B9EHT4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Clip3B9EHT4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.57■□□□□ 0.72
Clip3B9EHT4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clip3B9EHT4 Gm12922-201ENSMUST00000120626 809 ntBASIC19.56■□□□□ 0.72
Clip3B9EHT4 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.56■□□□□ 0.72
Clip3B9EHT4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clip3B9EHT4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clip3B9EHT4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Clip3B9EHT4 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Clip3B9EHT4 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clip3B9EHT4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clip3B9EHT4 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.55■□□□□ 0.72
Clip3B9EHT4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Gm21956-201ENSMUST00000179946 522 ntBASIC19.54■□□□□ 0.72
Clip3B9EHT4 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clip3B9EHT4 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms