Protein–RNA interactions for Protein: A2ALU4

Shroom2, Protein Shroom2, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom2A2ALU4 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Shroom2A2ALU4 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.92
Shroom2A2ALU4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC33.26■■■□□ 2.92
Shroom2A2ALU4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC33.26■■■□□ 2.91
Shroom2A2ALU4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC33.26■■■□□ 2.91
Shroom2A2ALU4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Shroom2A2ALU4 Gm43530-201ENSMUST00000195920 274 ntBASIC33.25■■■□□ 2.91
Shroom2A2ALU4 Ap3s1-204ENSMUST00000225520 957 ntBASIC33.25■■■□□ 2.91
Shroom2A2ALU4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
Shroom2A2ALU4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Shroom2A2ALU4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC33.25■■■□□ 2.91
Shroom2A2ALU4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC33.25■■■□□ 2.91
Shroom2A2ALU4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC33.25■■■□□ 2.91
Shroom2A2ALU4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC33.25■■■□□ 2.91
Shroom2A2ALU4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Shroom2A2ALU4 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
Shroom2A2ALU4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
Shroom2A2ALU4 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC33.24■■■□□ 2.91
Shroom2A2ALU4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC33.24■■■□□ 2.91
Shroom2A2ALU4 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC33.23■■■□□ 2.91
Shroom2A2ALU4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC33.23■■■□□ 2.91
Shroom2A2ALU4 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC33.23■■■□□ 2.91
Shroom2A2ALU4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC33.23■■■□□ 2.91
Shroom2A2ALU4 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC33.23■■■□□ 2.91
Shroom2A2ALU4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC33.22■■■□□ 2.91
Shroom2A2ALU4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
Shroom2A2ALU4 Gm11421-201ENSMUST00000122124 294 ntBASIC33.22■■■□□ 2.91
Shroom2A2ALU4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC33.22■■■□□ 2.91
Shroom2A2ALU4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Shroom2A2ALU4 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC33.21■■■□□ 2.91
Shroom2A2ALU4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Shroom2A2ALU4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC33.21■■■□□ 2.91
Shroom2A2ALU4 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC33.21■■■□□ 2.91
Shroom2A2ALU4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC33.21■■■□□ 2.91
Shroom2A2ALU4 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
Shroom2A2ALU4 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Shroom2A2ALU4 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
Shroom2A2ALU4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC33.2■■■□□ 2.91
Shroom2A2ALU4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC33.2■■■□□ 2.91
Shroom2A2ALU4 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC33.19■■■□□ 2.9
Shroom2A2ALU4 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC33.19■■■□□ 2.9
Shroom2A2ALU4 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Shroom2A2ALU4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC33.19■■■□□ 2.9
Shroom2A2ALU4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC33.19■■■□□ 2.9
Shroom2A2ALU4 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Shroom2A2ALU4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC33.18■■■□□ 2.9
Shroom2A2ALU4 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC33.18■■■□□ 2.9
Shroom2A2ALU4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC33.18■■■□□ 2.9
Shroom2A2ALU4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC33.17■■■□□ 2.9
Shroom2A2ALU4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
Shroom2A2ALU4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
Shroom2A2ALU4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
Shroom2A2ALU4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC33.16■■■□□ 2.9
Shroom2A2ALU4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC33.16■■■□□ 2.9
Shroom2A2ALU4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC33.16■■■□□ 2.9
Shroom2A2ALU4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC33.15■■■□□ 2.9
Shroom2A2ALU4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC33.15■■■□□ 2.9
Shroom2A2ALU4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
Shroom2A2ALU4 Gm3807-201ENSMUST00000193520 1168 ntBASIC33.14■■■□□ 2.9
Shroom2A2ALU4 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Shroom2A2ALU4 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC33.14■■■□□ 2.9
Shroom2A2ALU4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC33.14■■■□□ 2.9
Shroom2A2ALU4 Gm43859-201ENSMUST00000200075 1412 ntBASIC33.13■■■□□ 2.89
Shroom2A2ALU4 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
Shroom2A2ALU4 Gm20049-201ENSMUST00000219950 730 ntBASIC33.13■■■□□ 2.89
Shroom2A2ALU4 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
Shroom2A2ALU4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
Shroom2A2ALU4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
Shroom2A2ALU4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC33.13■■■□□ 2.89
Shroom2A2ALU4 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC33.13■■■□□ 2.89
Shroom2A2ALU4 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
Shroom2A2ALU4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC33.12■■■□□ 2.89
Shroom2A2ALU4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC33.12■■■□□ 2.89
Shroom2A2ALU4 Gm4430-201ENSMUST00000192413 1943 ntBASIC33.12■■■□□ 2.89
Shroom2A2ALU4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC33.12■■■□□ 2.89
Shroom2A2ALU4 Gm13148-201ENSMUST00000118892 745 ntBASIC33.12■■■□□ 2.89
Shroom2A2ALU4 Gm14281-201ENSMUST00000121700 1294 ntBASIC33.12■■■□□ 2.89
Shroom2A2ALU4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC33.12■■■□□ 2.89
Shroom2A2ALU4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC33.11■■■□□ 2.89
Shroom2A2ALU4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC33.11■■■□□ 2.89
Shroom2A2ALU4 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
Shroom2A2ALU4 AC135637.1-201ENSMUST00000227750 365 ntBASIC33.11■■■□□ 2.89
Shroom2A2ALU4 AC158990.1-201ENSMUST00000221450 2016 ntBASIC33.1■■■□□ 2.89
Shroom2A2ALU4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Shroom2A2ALU4 Gm6934-201ENSMUST00000194780 1905 ntBASIC33.09■■■□□ 2.89
Shroom2A2ALU4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC33.09■■■□□ 2.89
Shroom2A2ALU4 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Shroom2A2ALU4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC33.09■■■□□ 2.89
Shroom2A2ALU4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Shroom2A2ALU4 Gm7514-201ENSMUST00000209475 934 ntBASIC33.07■■■□□ 2.88
Shroom2A2ALU4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC33.07■■■□□ 2.88
Shroom2A2ALU4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
Shroom2A2ALU4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
Shroom2A2ALU4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC33.06■■■□□ 2.88
Shroom2A2ALU4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Shroom2A2ALU4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Shroom2A2ALU4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC33.06■■■□□ 2.88
Shroom2A2ALU4 Gm9988-201ENSMUST00000069786 435 ntBASIC33.06■■■□□ 2.88
Shroom2A2ALU4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Shroom2A2ALU4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms