Protein–RNA interactions for Protein: A2AJK6

Chd7, Chromodomain-helicase-DNA-binding protein 7, mousemouse

Known RBP Predictions only

Length 2,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd7A2AJK6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd7A2AJK6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Chd7A2AJK6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd7A2AJK6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Chd7A2AJK6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Chd7A2AJK6 Gm10252-201ENSMUST00000209541 832 ntBASIC20.59■□□□□ 0.89
Chd7A2AJK6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Chd7A2AJK6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Chd7A2AJK6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd7A2AJK6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd7A2AJK6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.58■□□□□ 0.89
Chd7A2AJK6 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd7A2AJK6 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Chd7A2AJK6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd7A2AJK6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Chd7A2AJK6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Chd7A2AJK6 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Chd7A2AJK6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd7A2AJK6 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.58■□□□□ 0.88
Chd7A2AJK6 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chd7A2AJK6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chd7A2AJK6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd7A2AJK6 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd7A2AJK6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.57■□□□□ 0.88
Chd7A2AJK6 Gm10653-202ENSMUST00000139570 835 ntBASIC20.57■□□□□ 0.88
Chd7A2AJK6 Gm42778-201ENSMUST00000199644 553 ntBASIC20.57■□□□□ 0.88
Chd7A2AJK6 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd7A2AJK6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chd7A2AJK6 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Chd7A2AJK6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd7A2AJK6 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.56■□□□□ 0.88
Chd7A2AJK6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Chd7A2AJK6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.56■□□□□ 0.88
Chd7A2AJK6 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd7A2AJK6 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chd7A2AJK6 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Chd7A2AJK6 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.55■□□□□ 0.88
Chd7A2AJK6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chd7A2AJK6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Chd7A2AJK6 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd7A2AJK6 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chd7A2AJK6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Chd7A2AJK6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd7A2AJK6 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd7A2AJK6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd7A2AJK6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd7A2AJK6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chd7A2AJK6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chd7A2AJK6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chd7A2AJK6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.53■□□□□ 0.88
Chd7A2AJK6 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.52■□□□□ 0.88
Chd7A2AJK6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chd7A2AJK6 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chd7A2AJK6 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.52■□□□□ 0.87
Chd7A2AJK6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chd7A2AJK6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chd7A2AJK6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.51■□□□□ 0.87
Chd7A2AJK6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chd7A2AJK6 Gm12527-201ENSMUST00000117967 564 ntBASIC20.51■□□□□ 0.87
Chd7A2AJK6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
Chd7A2AJK6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chd7A2AJK6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Chd7A2AJK6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.5■□□□□ 0.87
Chd7A2AJK6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chd7A2AJK6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd7A2AJK6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.49■□□□□ 0.87
Chd7A2AJK6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd7A2AJK6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Chd7A2AJK6 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd7A2AJK6 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Chd7A2AJK6 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.49■□□□□ 0.87
Chd7A2AJK6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd7A2AJK6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.48■□□□□ 0.87
Chd7A2AJK6 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd7A2AJK6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Chd7A2AJK6 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Chd7A2AJK6 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Chd7A2AJK6 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.48■□□□□ 0.87
Chd7A2AJK6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Chd7A2AJK6 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd7A2AJK6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Chd7A2AJK6 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Chd7A2AJK6 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.47■□□□□ 0.87
Chd7A2AJK6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd7A2AJK6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Chd7A2AJK6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Chd7A2AJK6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Chd7A2AJK6 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd7A2AJK6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd7A2AJK6 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.46■□□□□ 0.87
Chd7A2AJK6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.46■□□□□ 0.87
Chd7A2AJK6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd7A2AJK6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Chd7A2AJK6 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC20.46■□□□□ 0.87
Chd7A2AJK6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd7A2AJK6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.46■□□□□ 0.87
Chd7A2AJK6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd7A2AJK6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Chd7A2AJK6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Chd7A2AJK6 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms