Protein–RNA interactions for Protein: A0A1B0GSW2

Gm28729, Predicted gene 28729, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28729A0A1B0GSW2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
Gm28729A0A1B0GSW2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Gm28729A0A1B0GSW2 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Gm28729A0A1B0GSW2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Gm28729A0A1B0GSW2 Spcs1-204ENSMUST00000226782 949 ntBASIC20.12■□□□□ 0.81
Gm28729A0A1B0GSW2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28729A0A1B0GSW2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.12■□□□□ 0.81
Gm28729A0A1B0GSW2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28729A0A1B0GSW2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28729A0A1B0GSW2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28729A0A1B0GSW2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Gm28729A0A1B0GSW2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28729A0A1B0GSW2 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28729A0A1B0GSW2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.11■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Gm28729A0A1B0GSW2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Gm28729A0A1B0GSW2 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gm28729A0A1B0GSW2 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Gm28729A0A1B0GSW2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28729A0A1B0GSW2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28729A0A1B0GSW2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Gm28729A0A1B0GSW2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28729A0A1B0GSW2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.08■□□□□ 0.81
Gm28729A0A1B0GSW2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gm28729A0A1B0GSW2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gm28729A0A1B0GSW2 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28729A0A1B0GSW2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.07■□□□□ 0.8
Gm28729A0A1B0GSW2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28729A0A1B0GSW2 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28729A0A1B0GSW2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28729A0A1B0GSW2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28729A0A1B0GSW2 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gm28729A0A1B0GSW2 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
Gm28729A0A1B0GSW2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Gm5874-201ENSMUST00000096101 508 ntBASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gm28729A0A1B0GSW2 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gm28729A0A1B0GSW2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gm28729A0A1B0GSW2 Gm26833-201ENSMUST00000180899 440 ntBASIC20.04■□□□□ 0.8
Gm28729A0A1B0GSW2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.04■□□□□ 0.8
Gm28729A0A1B0GSW2 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
Gm28729A0A1B0GSW2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 8.2 ms