Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Ccdc194A0A140LIT1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.31■□□□□ 0.84
Ccdc194A0A140LIT1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc194A0A140LIT1 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc194A0A140LIT1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc194A0A140LIT1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc194A0A140LIT1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc194A0A140LIT1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Ccdc194A0A140LIT1 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
Ccdc194A0A140LIT1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc194A0A140LIT1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.28■□□□□ 0.84
Ccdc194A0A140LIT1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc194A0A140LIT1 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc194A0A140LIT1 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc194A0A140LIT1 Gm5921-201ENSMUST00000075898 882 ntBASIC20.27■□□□□ 0.84
Ccdc194A0A140LIT1 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc194A0A140LIT1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc194A0A140LIT1 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc194A0A140LIT1 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc194A0A140LIT1 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc194A0A140LIT1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc194A0A140LIT1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc194A0A140LIT1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ccdc194A0A140LIT1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 Gm43566-201ENSMUST00000196851 808 ntBASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc194A0A140LIT1 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc194A0A140LIT1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc194A0A140LIT1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc194A0A140LIT1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc194A0A140LIT1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc194A0A140LIT1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc194A0A140LIT1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccdc194A0A140LIT1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc194A0A140LIT1 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc194A0A140LIT1 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc194A0A140LIT1 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc194A0A140LIT1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc194A0A140LIT1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc194A0A140LIT1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc194A0A140LIT1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Ccdc194A0A140LIT1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc194A0A140LIT1 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc194A0A140LIT1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc194A0A140LIT1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc194A0A140LIT1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc194A0A140LIT1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc194A0A140LIT1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ccdc194A0A140LIT1 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc194A0A140LIT1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc194A0A140LIT1 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc194A0A140LIT1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Ccdc194A0A140LIT1 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc194A0A140LIT1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc194A0A140LIT1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc194A0A140LIT1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc194A0A140LIT1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Ccdc194A0A140LIT1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc194A0A140LIT1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc194A0A140LIT1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms