Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Trav13n-4A0A0G2JG01 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-4A0A0G2JG01 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-4A0A0G2JG01 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-4A0A0G2JG01 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-4A0A0G2JG01 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-4A0A0G2JG01 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav13n-4A0A0G2JG01 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gm9847-201ENSMUST00000052528 599 ntBASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav13n-4A0A0G2JG01 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav13n-4A0A0G2JG01 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gm22238-201ENSMUST00000175222 88 ntBASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav13n-4A0A0G2JG01 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gm11847-201ENSMUST00000125165 1119 ntBASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav13n-4A0A0G2JG01 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-4A0A0G2JG01 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Trav13n-4A0A0G2JG01 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-4A0A0G2JG01 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-4A0A0G2JG01 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-4A0A0G2JG01 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-4A0A0G2JG01 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trav13n-4A0A0G2JG01 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Notumos-201ENSMUST00000151998 2659 ntBASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav13n-4A0A0G2JG01 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav13n-4A0A0G2JG01 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav13n-4A0A0G2JG01 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms