Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.33■□□□□ 0.05
Trav3n-3A0A0G2JEM0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav3n-3A0A0G2JEM0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm6311-201ENSMUST00000073790 878 ntBASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trav3n-3A0A0G2JEM0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm42418-201ENSMUST00000182010 1831 ntBASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm42900-201ENSMUST00000197184 2167 ntBASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Trav3n-3A0A0G2JEM0 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms