Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav4-3A0A0B4J1K1 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav4-3A0A0B4J1K1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 AC116713.1-201ENSMUST00000215074 430 ntBASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC13.92□□□□□ -0.18
Trav4-3A0A0B4J1K1 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav4-3A0A0B4J1K1 Dapk1-207ENSMUST00000226059 5009 ntBASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav4-3A0A0B4J1K1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav4-3A0A0B4J1K1 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav4-3A0A0B4J1K1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trav4-3A0A0B4J1K1 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms