Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.07■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.07■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Gm43759-201ENSMUST00000196925 1261 ntBASIC21.06■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv5-43A0A0B4J1J2 AC122428.2-201ENSMUST00000216321 1832 ntBASIC21.06■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC21.05■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv5-43A0A0B4J1J2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Gm43137-201ENSMUST00000198052 594 ntBASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.04■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Igkv5-43A0A0B4J1J2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Igkv5-43A0A0B4J1J2 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC21.01■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.01■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv5-43A0A0B4J1J2 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Igkv5-43A0A0B4J1J2 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.98■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Igkv5-43A0A0B4J1J2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 61.8 ms