Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trbv16A0A0B4J1H3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv16A0A0B4J1H3 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.79□□□□□ -0.04
Trbv16A0A0B4J1H3 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv16A0A0B4J1H3 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv16A0A0B4J1H3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv16A0A0B4J1H3 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trbv16A0A0B4J1H3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trbv16A0A0B4J1H3 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trbv16A0A0B4J1H3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv16A0A0B4J1H3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv16A0A0B4J1H3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Trbv16A0A0B4J1H3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv16A0A0B4J1H3 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Trbv16A0A0B4J1H3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv16A0A0B4J1H3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv16A0A0B4J1H3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trbv16A0A0B4J1H3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Gm12366-201ENSMUST00000121722 873 ntBASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Gm5786-201ENSMUST00000085368 882 ntBASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trbv16A0A0B4J1H3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv16A0A0B4J1H3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv16A0A0B4J1H3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Mir6538-201ENSMUST00000183713 110 ntBASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv16A0A0B4J1H3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms