Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trbv13-3A0A0B4J1H2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Nsd1-206ENSMUST00000224918 1001 ntBASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.93■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC15.93■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC15.9■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trbv13-3A0A0B4J1H2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv13-3A0A0B4J1H2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv13-3A0A0B4J1H2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trbv13-3A0A0B4J1H2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv13-3A0A0B4J1H2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv13-3A0A0B4J1H2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms