Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv12-1A0A0B4J1H0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv12-1A0A0B4J1H0 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm12922-201ENSMUST00000120626 809 ntBASIC18.13■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm43530-201ENSMUST00000195920 274 ntBASIC18.13■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.11■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv12-1A0A0B4J1H0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv12-1A0A0B4J1H0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv12-1A0A0B4J1H0 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv12-1A0A0B4J1H0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms