Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv2A0A0B4J1G8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Gm27502-201ENSMUST00000183495 199 ntBASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.17■□□□□ 0.5
Trbv2A0A0B4J1G8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.16■□□□□ 0.5
Trbv2A0A0B4J1G8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv2A0A0B4J1G8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
Trbv2A0A0B4J1G8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
Trbv2A0A0B4J1G8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv2A0A0B4J1G8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv2A0A0B4J1G8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv2A0A0B4J1G8 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv2A0A0B4J1G8 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv2A0A0B4J1G8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.14■□□□□ 0.49
Trbv2A0A0B4J1G8 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv2A0A0B4J1G8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv2A0A0B4J1G8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv2A0A0B4J1G8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv2A0A0B4J1G8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv2A0A0B4J1G8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Trbv2A0A0B4J1G8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv2A0A0B4J1G8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv2A0A0B4J1G8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Trbv2A0A0B4J1G8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trbv2A0A0B4J1G8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trbv2A0A0B4J1G8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Trbv2A0A0B4J1G8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Gm7332-201ENSMUST00000118351 454 ntBASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Trbv2A0A0B4J1G8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.1■□□□□ 0.49
Trbv2A0A0B4J1G8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
Trbv2A0A0B4J1G8 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv2A0A0B4J1G8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv2A0A0B4J1G8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv2A0A0B4J1G8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trbv2A0A0B4J1G8 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms