Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Gm7291-201ENSMUST00000199147 382 ntBASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.02■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Ighv3-4A0A0A6YXF1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.02■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ighv3-4A0A0A6YXF1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm42569-201ENSMUST00000200539 472 ntBASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm10209-201ENSMUST00000203397 1607 ntBASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm40848-201ENSMUST00000221998 324 ntBASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.98■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm42642-201ENSMUST00000200683 355 ntBASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm26571-201ENSMUST00000181399 666 ntBASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Gm27405-201ENSMUST00000184201 112 ntBASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Ighv3-4A0A0A6YXF1 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC16.95■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Ighv3-4A0A0A6YXF1 Smad6-203ENSMUST00000179458 273 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms