Protein–RNA interactions for Protein: A0A087WRT9

Gm28490, Predicted gene 28490, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28490A0A087WRT9 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28490A0A087WRT9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Gm28490A0A087WRT9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Gm28490A0A087WRT9 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Gm28490A0A087WRT9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28490A0A087WRT9 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28490A0A087WRT9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28490A0A087WRT9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC18.1■□□□□ 0.49
Gm28490A0A087WRT9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Gm28490A0A087WRT9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Gm28490A0A087WRT9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Gm28490A0A087WRT9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm28490A0A087WRT9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm28490A0A087WRT9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Gm28490A0A087WRT9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
Gm28490A0A087WRT9 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Gm28490A0A087WRT9 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Gm28490A0A087WRT9 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28490A0A087WRT9 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28490A0A087WRT9 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Gm28490A0A087WRT9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28490A0A087WRT9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Gm28490A0A087WRT9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Notumos-201ENSMUST00000151998 2659 ntBASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Gm28490A0A087WRT9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Gm28490A0A087WRT9 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.05■□□□□ 0.48
Gm28490A0A087WRT9 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Gm28490A0A087WRT9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms