Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav9d-1A0A075B699 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav9d-1A0A075B699 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav9d-1A0A075B699 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav9d-1A0A075B699 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav9d-1A0A075B699 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 AC122428.2-201ENSMUST00000216321 1832 ntBASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav9d-1A0A075B699 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav9d-1A0A075B699 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav9d-1A0A075B699 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms