Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav12-3A0A075B648 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav12-3A0A075B648 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 AC158990.1-201ENSMUST00000221450 2016 ntBASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav12-3A0A075B648 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav12-3A0A075B648 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav12-3A0A075B648 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Rarb-207ENSMUST00000225921 2756 ntBASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav12-3A0A075B648 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav12-3A0A075B648 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav12-3A0A075B648 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms