Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav13-1A0A075B644 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-1A0A075B644 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav13-1A0A075B644 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav13-1A0A075B644 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13-1A0A075B644 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav13-1A0A075B644 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav13-1A0A075B644 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Gm12922-201ENSMUST00000120626 809 ntBASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav13-1A0A075B644 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trav13-1A0A075B644 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-1A0A075B644 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-1A0A075B644 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-1A0A075B644 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-1A0A075B644 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav13-1A0A075B644 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.42□□□□□ -0.1
Trav13-1A0A075B644 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.42□□□□□ -0.1
Trav13-1A0A075B644 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav13-1A0A075B644 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav13-1A0A075B644 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav13-1A0A075B644 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Golgb1-201ENSMUST00000023534 498 ntBASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Gm4430-201ENSMUST00000192413 1943 ntBASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13-1A0A075B644 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13-1A0A075B644 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 10 ms