Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav13d-1A0A075B606 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav13d-1A0A075B606 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-1A0A075B606 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-1A0A075B606 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trav13d-1A0A075B606 AC140930.3-201ENSMUST00000222935 274 ntBASIC14.88□□□□□ -0.03
Trav13d-1A0A075B606 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trav13d-1A0A075B606 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-1A0A075B606 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-1A0A075B606 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav13d-1A0A075B606 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav13d-1A0A075B606 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav13d-1A0A075B606 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Gm21956-201ENSMUST00000179946 522 ntBASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Notumos-201ENSMUST00000151998 2659 ntBASIC14.85□□□□□ -0.03
Trav13d-1A0A075B606 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Golgb1-201ENSMUST00000023534 498 ntBASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav13d-1A0A075B606 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms