Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Trav1A0A075B5Z4 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Trav1A0A075B5Z4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Trav1A0A075B5Z4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav1A0A075B5Z4 Notumos-201ENSMUST00000151998 2659 ntBASIC19.04■□□□□ 0.64
Trav1A0A075B5Z4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Trav1A0A075B5Z4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.04■□□□□ 0.64
Trav1A0A075B5Z4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Trav1A0A075B5Z4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav1A0A075B5Z4 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav1A0A075B5Z4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Trav1A0A075B5Z4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Trav1A0A075B5Z4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Trav1A0A075B5Z4 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav1A0A075B5Z4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Trav1A0A075B5Z4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Trav1A0A075B5Z4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Trav1A0A075B5Z4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Trav1A0A075B5Z4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Trav1A0A075B5Z4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav1A0A075B5Z4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav1A0A075B5Z4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav1A0A075B5Z4 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav1A0A075B5Z4 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Trav1A0A075B5Z4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms