Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trbv4A0A075B5I2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trbv4A0A075B5I2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trbv4A0A075B5I2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.56■□□□□ 0.88
Trbv4A0A075B5I2 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trbv4A0A075B5I2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trbv4A0A075B5I2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trbv4A0A075B5I2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trbv4A0A075B5I2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trbv4A0A075B5I2 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv4A0A075B5I2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.54■□□□□ 0.88
Trbv4A0A075B5I2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trbv4A0A075B5I2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv4A0A075B5I2 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv4A0A075B5I2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv4A0A075B5I2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv4A0A075B5I2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trbv4A0A075B5I2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trbv4A0A075B5I2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 Gm15546-201ENSMUST00000122095 826 ntBASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trbv4A0A075B5I2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.51■□□□□ 0.87
Trbv4A0A075B5I2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv4A0A075B5I2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv4A0A075B5I2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv4A0A075B5I2 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trbv4A0A075B5I2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv4A0A075B5I2 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trbv4A0A075B5I2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trbv4A0A075B5I2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Gm7143-201ENSMUST00000222811 859 ntBASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trbv4A0A075B5I2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trbv4A0A075B5I2 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Trbv4A0A075B5I2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.48■□□□□ 0.87
Trbv4A0A075B5I2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Trbv4A0A075B5I2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv4A0A075B5I2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trbv4A0A075B5I2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trbv4A0A075B5I2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trbv4A0A075B5I2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms