Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm18227-201ENSMUST00000211082 1468 ntBASIC12.13□□□□□ -0.47
Speer3W4VSP1 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Speer3W4VSP1 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.12□□□□□ -0.47
Speer3W4VSP1 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.12□□□□□ -0.47
Speer3W4VSP1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gm18348-201ENSMUST00000191227 820 ntBASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gm37201-201ENSMUST00000191845 523 ntBASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gm38002-201ENSMUST00000193255 180 ntBASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gm42591-201ENSMUST00000197249 700 ntBASIC12.12□□□□□ -0.47
Speer3W4VSP1 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC12.12□□□□□ -0.47
Speer3W4VSP1 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.12□□□□□ -0.47
Speer3W4VSP1 AC154527.3-201ENSMUST00000225519 989 ntBASIC12.12□□□□□ -0.47
Speer3W4VSP1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Speer3W4VSP1 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Speer3W4VSP1 Gm11342-203ENSMUST00000224879 1324 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm24231-201ENSMUST00000104315 133 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm8261-201ENSMUST00000119275 1208 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm15741-201ENSMUST00000119401 754 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm12400-201ENSMUST00000120915 1003 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm13147-202ENSMUST00000177526 1173 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Mospd4-201ENSMUST00000180618 576 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gm6013-201ENSMUST00000212264 699 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Olfr153-201ENSMUST00000217113 1258 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 AC139323.1-201ENSMUST00000223370 1040 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 AC117949.2-201ENSMUST00000225900 584 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.11□□□□□ -0.47
Speer3W4VSP1 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.11□□□□□ -0.47
Speer3W4VSP1 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Speer3W4VSP1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms