Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm5363-201ENSMUST00000211927 938 ntBASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm807-202ENSMUST00000224929 408 ntBASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm9072-201ENSMUST00000218390 1514 ntBASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Prpf40aQ9R1C7 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm11509-201ENSMUST00000117358 325 ntBASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm27341-201ENSMUST00000183570 106 ntBASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm3332-201ENSMUST00000189337 928 ntBASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm9797-202ENSMUST00000218003 294 ntBASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Prpf40aQ9R1C7 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm12857-201ENSMUST00000117678 592 ntBASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm9192-201ENSMUST00000183221 985 ntBASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Prpf40aQ9R1C7 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms