Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Rrp8Q9DB85 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm22146-201ENSMUST00000157397 288 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm8451-201ENSMUST00000170338 447 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm7536-201ENSMUST00000077389 444 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm5453-201ENSMUST00000080866 447 ntBASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Rrp8Q9DB85 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Gm13549-201ENSMUST00000118339 796 ntBASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Gm5257-201ENSMUST00000121823 790 ntBASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Gm43778-201ENSMUST00000199438 199 ntBASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Gm6423-201ENSMUST00000204315 934 ntBASIC11.35□□□□□ -0.59
Rrp8Q9DB85 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC11.35□□□□□ -0.59
Rrp8Q9DB85 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.35□□□□□ -0.59
Rrp8Q9DB85 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Gm20633-201ENSMUST00000176742 2831 ntBASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Rrp8Q9DB85 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Rrp8Q9DB85 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms