Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Ssbp3Q9D032 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm14441-201ENSMUST00000121960 540 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm22334-201ENSMUST00000158070 133 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm28937-201ENSMUST00000185413 695 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm29400-201ENSMUST00000187208 695 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm28662-201ENSMUST00000188446 695 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm28251-201ENSMUST00000188835 695 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm37318-201ENSMUST00000194325 695 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm38017-201ENSMUST00000194768 695 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm37287-201ENSMUST00000195449 695 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gm37793-201ENSMUST00000195548 695 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Nr5a2-202ENSMUST00000168126 3446 ntTSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Ssbp3Q9D032 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.68□□□□□ -0.86
Ssbp3Q9D032 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms