Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm28937-201ENSMUST00000185413 695 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm29400-201ENSMUST00000187208 695 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm28662-201ENSMUST00000188446 695 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm28251-201ENSMUST00000188835 695 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm37318-201ENSMUST00000194325 695 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm38017-201ENSMUST00000194768 695 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm37287-201ENSMUST00000195449 695 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm37793-201ENSMUST00000195548 695 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm44974-201ENSMUST00000206387 1279 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm45598-202ENSMUST00000210719 986 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.91□□□□□ -0.5
Snf8Q9CZ28 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm37580-201ENSMUST00000192408 2800 ntBASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm6548-201ENSMUST00000167498 1165 ntBASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm43962-201ENSMUST00000203898 190 ntBASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gzmn-202ENSMUST00000225535 989 ntBASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm5705-201ENSMUST00000066241 711 ntBASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm14005-209ENSMUST00000224993 1832 ntBASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Gm36957-201ENSMUST00000192982 2824 ntBASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Snf8Q9CZ28 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Snf8Q9CZ28 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Snf8Q9CZ28 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Snf8Q9CZ28 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Snf8Q9CZ28 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC11.89□□□□□ -0.51
Snf8Q9CZ28 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms