Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 AC109214.1-201ENSMUST00000219520 1372 ntBASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Ssu72Q9CY97 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm8876-201ENSMUST00000120768 1122 ntBASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm6963-201ENSMUST00000147879 379 ntBASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm44008-201ENSMUST00000204345 412 ntBASIC11.48□□□□□ -0.57
Ssu72Q9CY97 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Ssu72Q9CY97 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 4933409D19Rik-201ENSMUST00000193674 1557 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Gm11930-201ENSMUST00000117788 190 ntBASIC11.47□□□□□ -0.57
Ssu72Q9CY97 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Rps4l-202ENSMUST00000204242 789 ntBASIC11.47□□□□□ -0.57
Ssu72Q9CY97 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ssu72Q9CY97 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms