Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm43817-201ENSMUST00000196459 2262 ntBASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm6621-201ENSMUST00000193251 772 ntBASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.64□□□□□ -0.39
Ssr1Q9CY50 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.64□□□□□ -0.39
Ssr1Q9CY50 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.64□□□□□ -0.39
Ssr1Q9CY50 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Tln2-205ENSMUST00000215267 4999 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Cit-212ENSMUST00000141101 6794 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Ank3-204ENSMUST00000092432 5832 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm21115-201ENSMUST00000187565 2578 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm5419-201ENSMUST00000119301 527 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Ap1g1-206ENSMUST00000179104 1096 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm9230-201ENSMUST00000188228 532 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gzmn-202ENSMUST00000225535 989 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm7399-201ENSMUST00000032395 858 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Steap3-203ENSMUST00000112641 5158 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Gm37422-201ENSMUST00000193794 4718 ntBASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ssr1Q9CY50 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms