Protein–RNA interactions for Protein: Q9CWS1

Rnf135, E3 ubiquitin-protein ligase RNF135, mousemouse

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf135Q9CWS1 Gm38140-201ENSMUST00000193617 2755 ntBASIC12.07□□□□□ -0.48
Rnf135Q9CWS1 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf135Q9CWS1 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Rnf135Q9CWS1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Gm12266-201ENSMUST00000120311 962 ntBASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Rnf135Q9CWS1 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm18806-201ENSMUST00000207607 1775 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm13611-201ENSMUST00000118269 318 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm17040-202ENSMUST00000170597 889 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm27552-201ENSMUST00000183351 62 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm27844-201ENSMUST00000183613 62 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm17812-201ENSMUST00000204935 318 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gm5705-201ENSMUST00000066241 711 ntBASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.05□□□□□ -0.48
Rnf135Q9CWS1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Rnf135Q9CWS1 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms