Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm11783-201ENSMUST00000119549 885 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm4726-201ENSMUST00000135604 736 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm6019-201ENSMUST00000148369 736 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Nrxn1-214ENSMUST00000173222 859 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm6114-201ENSMUST00000182472 968 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm28180-201ENSMUST00000189608 722 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm17983-201ENSMUST00000190766 594 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Gm14005-208ENSMUST00000223654 681 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Otud1Q9CUB6 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm18367-201ENSMUST00000176139 600 ntBASIC11.09□□□□□ -0.63
Otud1Q9CUB6 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 CT025538.2-201ENSMUST00000226083 772 ntBASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Otud1Q9CUB6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Otud1Q9CUB6 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.08□□□□□ -0.63
Otud1Q9CUB6 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Otud1Q9CUB6 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Otud1Q9CUB6 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.08□□□□□ -0.64
Otud1Q9CUB6 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Otud1Q9CUB6 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
Otud1Q9CUB6 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Otud1Q9CUB6 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Otud1Q9CUB6 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Otud1Q9CUB6 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms