Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Gm15455-201ENSMUST00000117459 2557 ntBASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sec61bQ9CQS8 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Col6a3-201ENSMUST00000056925 10106 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Npy1r-202ENSMUST00000212588 2770 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm3550-201ENSMUST00000105038 1656 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 AC091458.1-201ENSMUST00000220902 1361 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm23596-201ENSMUST00000104304 132 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm11511-201ENSMUST00000118146 540 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm15741-201ENSMUST00000119401 754 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm15937-201ENSMUST00000120727 1235 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm6039-201ENSMUST00000121667 1250 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm5409-201ENSMUST00000160346 698 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm8343-201ENSMUST00000182705 994 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm2965-201ENSMUST00000198365 343 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm4482-201ENSMUST00000200876 742 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm44585-201ENSMUST00000207150 607 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm45484-201ENSMUST00000210310 1141 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm19994-201ENSMUST00000217086 586 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm9826-201ENSMUST00000029124 1299 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Gm10288-201ENSMUST00000084614 537 ntBASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Pecam1-204ENSMUST00000106796 3441 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Lrat-201ENSMUST00000029632 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
Sec61bQ9CQS8 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms