Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Gm11663-201ENSMUST00000117888 290 ntBASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Gm43931-201ENSMUST00000204817 2870 ntBASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Gm38055-201ENSMUST00000195353 2217 ntBASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim11Q99PQ2 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Gm11783-201ENSMUST00000119549 885 ntBASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Gm34767-201ENSMUST00000191813 1062 ntBASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim11Q99PQ2 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Gm8815-201ENSMUST00000173809 620 ntBASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim11Q99PQ2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms