Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm6038-201ENSMUST00000154310 948 ntBASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm22994-201ENSMUST00000175422 82 ntBASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm17514-201ENSMUST00000181863 1102 ntTSL 5 BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm8828-201ENSMUST00000196786 1290 ntBASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Gm18862-201ENSMUST00000204643 933 ntBASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 AC154585.1-201ENSMUST00000218917 997 ntBASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Pcdh15Q99PJ1 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gm14592-201ENSMUST00000117201 560 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gm12946-201ENSMUST00000122969 519 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 4930505M18Rik-201ENSMUST00000175854 1288 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Kif4-ps-202ENSMUST00000185083 652 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 1700019D03Rik-205ENSMUST00000190726 702 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gm44304-201ENSMUST00000200509 145 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gm44917-201ENSMUST00000208798 520 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gm7242-201ENSMUST00000221134 705 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 AC134793.1-202ENSMUST00000227444 803 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gm25514-201ENSMUST00000083860 135 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Ccm2-203ENSMUST00000109722 1760 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Gm5472-201ENSMUST00000178604 1678 ntBASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Pcdh15Q99PJ1 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Pcdh15Q99PJ1 Gm19027-201ENSMUST00000187291 1355 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms