Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rtn4Q99P72 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rtn4Q99P72 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rtn4Q99P72 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rtn4Q99P72 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm26361-201ENSMUST00000158868 186 ntBASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm8956-201ENSMUST00000203939 825 ntBASIC15.59■□□□□ 0.09
Rtn4Q99P72 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Il15-203ENSMUST00000209573 1164 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm18212-201ENSMUST00000211678 889 ntBASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 AC158536.1-201ENSMUST00000222510 256 ntBASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gzmn-202ENSMUST00000225535 989 ntBASIC15.59■□□□□ 0.09
Rtn4Q99P72 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Gm44094-201ENSMUST00000204703 2030 ntBASIC15.59■□□□□ 0.09
Rtn4Q99P72 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4Q99P72 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Gm37373-201ENSMUST00000194005 2812 ntBASIC15.58■□□□□ 0.09
Rtn4Q99P72 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
Rtn4Q99P72 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Rtn4Q99P72 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4Q99P72 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm14862-201ENSMUST00000115553 870 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm14480-201ENSMUST00000118521 433 ntBASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm14200-201ENSMUST00000122256 192 ntBASIC15.58■□□□□ 0.08
Rtn4Q99P72 Optc-204ENSMUST00000149380 1180 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm2888-202ENSMUST00000178577 618 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm3685-202ENSMUST00000179199 618 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm28083-201ENSMUST00000186533 538 ntTSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm37427-201ENSMUST00000192356 906 ntTSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm19231-201ENSMUST00000193212 830 ntBASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm7238-201ENSMUST00000206467 973 ntBASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm44690-201ENSMUST00000207984 382 ntBASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm45224-201ENSMUST00000208203 414 ntBASIC15.58■□□□□ 0.08
Rtn4Q99P72 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC15.58■□□□□ 0.08
Rtn4Q99P72 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4Q99P72 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 71 ms