Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Plpbp-203ENSMUST00000209525 5767 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Chmp1b1Q99LU0 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Gm17244-201ENSMUST00000192482 3416 ntBASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Gm43622-201ENSMUST00000200140 2019 ntBASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Gm45433-201ENSMUST00000209386 247 ntBASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Chmp1b1Q99LU0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm11511-201ENSMUST00000118146 540 ntBASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm16570-201ENSMUST00000161951 436 ntBASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 AC159205.5-202ENSMUST00000224849 386 ntBASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
Chmp1b1Q99LU0 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Chmp1b1Q99LU0 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms