Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.28□□□□□ -0.12
RtcbQ99LF4 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 AC122035.1-201ENSMUST00000227576 1016 ntBASIC14.28□□□□□ -0.12
RtcbQ99LF4 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RtcbQ99LF4 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.27□□□□□ -0.12
RtcbQ99LF4 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.27□□□□□ -0.12
RtcbQ99LF4 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
RtcbQ99LF4 Gm11993-201ENSMUST00000121861 820 ntBASIC14.27□□□□□ -0.13
RtcbQ99LF4 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm11942-201ENSMUST00000180255 345 ntBASIC14.27□□□□□ -0.13
RtcbQ99LF4 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm45094-201ENSMUST00000207013 617 ntBASIC14.27□□□□□ -0.13
RtcbQ99LF4 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm9102-201ENSMUST00000219250 465 ntBASIC14.27□□□□□ -0.13
RtcbQ99LF4 AC115304.2-201ENSMUST00000226399 332 ntBASIC14.27□□□□□ -0.13
RtcbQ99LF4 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.27□□□□□ -0.13
RtcbQ99LF4 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RtcbQ99LF4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Mir181d-201ENSMUST00000102383 72 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 Gm25148-201ENSMUST00000104611 123 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Gm38314-201ENSMUST00000195709 625 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC14.26□□□□□ -0.13
RtcbQ99LF4 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RtcbQ99LF4 Id2-203ENSMUST00000222667 958 ntBASIC14.26□□□□□ -0.13
RtcbQ99LF4 CT010480.2-201ENSMUST00000225424 737 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms