Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm11340-201ENSMUST00000119226 412 ntBASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm3671-201ENSMUST00000182463 1007 ntBASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm9136-201ENSMUST00000193368 454 ntBASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm35960-201ENSMUST00000202712 767 ntBASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm8342-201ENSMUST00000209839 757 ntBASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm45594-201ENSMUST00000211717 241 ntBASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Pcdhb18Q91Y02 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb18Q91Y02 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb18Q91Y02 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb18Q91Y02 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Pcdhb18Q91Y02 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Pcdhb18Q91Y02 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm12419-201ENSMUST00000116649 636 ntBASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm9089-201ENSMUST00000122027 526 ntBASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm44315-201ENSMUST00000203041 219 ntBASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm5451-201ENSMUST00000080545 579 ntBASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Olfr584-201ENSMUST00000098210 964 ntBASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Pcdhb18Q91Y02 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Pcdhb18Q91Y02 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms