Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Pcdhb6Q91XZ4 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm12217-201ENSMUST00000118858 696 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm3150-201ENSMUST00000166418 204 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm29499-201ENSMUST00000189151 486 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm28329-201ENSMUST00000191208 689 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm29171-201ENSMUST00000191397 486 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 AC122891.1-201ENSMUST00000218671 268 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Pcdhb6Q91XZ4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm45053-201ENSMUST00000206112 2499 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm22711-201ENSMUST00000116890 133 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm13809-201ENSMUST00000117921 597 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm6506-201ENSMUST00000119775 1136 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm25732-201ENSMUST00000175168 60 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm29199-201ENSMUST00000187766 775 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Ntng1-201ENSMUST00000051253 327 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.87□□□□□ -0.51
Pcdhb6Q91XZ4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms