Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trex1Q91XB0 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.23□□□□□ -0.29
Trex1Q91XB0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm13022-201ENSMUST00000121181 285 ntBASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm24992-201ENSMUST00000157412 130 ntBASIC13.23□□□□□ -0.29
Trex1Q91XB0 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm7082-201ENSMUST00000209880 969 ntBASIC13.23□□□□□ -0.29
Trex1Q91XB0 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trex1Q91XB0 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.23□□□□□ -0.29
Trex1Q91XB0 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Gm11980-201ENSMUST00000121445 986 ntBASIC13.22□□□□□ -0.29
Trex1Q91XB0 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.22□□□□□ -0.29
Trex1Q91XB0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.22□□□□□ -0.29
Trex1Q91XB0 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC13.22□□□□□ -0.29
Trex1Q91XB0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.22□□□□□ -0.29
Trex1Q91XB0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Gm9081-201ENSMUST00000182346 991 ntBASIC13.22□□□□□ -0.29
Trex1Q91XB0 Gm18776-201ENSMUST00000188833 654 ntBASIC13.22□□□□□ -0.29
Trex1Q91XB0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trex1Q91XB0 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trex1Q91XB0 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trex1Q91XB0 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trex1Q91XB0 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.21□□□□□ -0.29
Trex1Q91XB0 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Gm43334-201ENSMUST00000197740 1318 ntBASIC13.21□□□□□ -0.29
Trex1Q91XB0 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trex1Q91XB0 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Trex1Q91XB0 Gm9673-201ENSMUST00000119287 781 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms