Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm5778-201ENSMUST00000171003 1072 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm7696-201ENSMUST00000174727 907 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm23153-201ENSMUST00000175323 313 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 Calm5-202ENSMUST00000184271 423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm44158-201ENSMUST00000203881 505 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 CT009713.5-203ENSMUST00000224218 2079 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.47□□□□□ -0.41
TraipQ8VIG6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
TraipQ8VIG6 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Gm19692-201ENSMUST00000203856 2084 ntBASIC12.46□□□□□ -0.41
TraipQ8VIG6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.46□□□□□ -0.41
TraipQ8VIG6 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
TraipQ8VIG6 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
TraipQ8VIG6 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.45□□□□□ -0.42
TraipQ8VIG6 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Gm26013-201ENSMUST00000104404 119 ntBASIC12.45□□□□□ -0.42
TraipQ8VIG6 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.45□□□□□ -0.42
TraipQ8VIG6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Gm26134-201ENSMUST00000178484 110 ntBASIC12.45□□□□□ -0.42
TraipQ8VIG6 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Gm7504-201ENSMUST00000201449 424 ntBASIC12.45□□□□□ -0.42
TraipQ8VIG6 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.45□□□□□ -0.42
TraipQ8VIG6 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.45□□□□□ -0.42
TraipQ8VIG6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms