Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rprd1aQ8VDS4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rprd1aQ8VDS4 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Rprd1aQ8VDS4 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rprd1aQ8VDS4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Rprd1aQ8VDS4 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Rprd1aQ8VDS4 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Mir8093-201ENSMUST00000185043 137 ntBASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Gm6108-201ENSMUST00000208365 367 ntBASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rprd1aQ8VDS4 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.5
Rprd1aQ8VDS4 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Rprd1aQ8VDS4 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.96□□□□□ -0.5
Rprd1aQ8VDS4 Rgr-203ENSMUST00000225070 4704 ntBASIC11.96□□□□□ -0.5
Rprd1aQ8VDS4 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rprd1aQ8VDS4 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm9540-201ENSMUST00000188230 478 ntBASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm8959-201ENSMUST00000213150 571 ntBASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.95□□□□□ -0.5
Rprd1aQ8VDS4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rprd1aQ8VDS4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms