Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Mir219a-1-201ENSMUST00000083621 110 ntBASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm42913-201ENSMUST00000197936 1853 ntBASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfwd3Q8CIK8 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm24891-201ENSMUST00000104391 136 ntBASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm8815-201ENSMUST00000173809 620 ntBASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm5733-201ENSMUST00000190232 939 ntBASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm10288-201ENSMUST00000084614 537 ntBASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfwd3Q8CIK8 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm14058-201ENSMUST00000116082 735 ntBASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm7851-201ENSMUST00000117574 323 ntBASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm11941-201ENSMUST00000119904 610 ntBASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm5714-201ENSMUST00000197343 566 ntBASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm5369-201ENSMUST00000217499 588 ntBASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfwd3Q8CIK8 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms