Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Brf1Q8CFK2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Brf1Q8CFK2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Brf1Q8CFK2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Brf1Q8CFK2 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
Brf1Q8CFK2 Gm6903-201ENSMUST00000160509 1366 ntBASIC13.96□□□□□ -0.18
Brf1Q8CFK2 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Brf1Q8CFK2 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Gm12566-201ENSMUST00000121479 359 ntBASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Gm7150-201ENSMUST00000122032 981 ntBASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Gm10774-201ENSMUST00000188689 204 ntBASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Spcs1-203ENSMUST00000226374 592 ntBASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Brf1Q8CFK2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Gm14193-201ENSMUST00000105067 153 ntBASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Gm3329-201ENSMUST00000159873 556 ntBASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Gm16570-201ENSMUST00000161951 436 ntBASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Gm18367-201ENSMUST00000176139 600 ntBASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.94□□□□□ -0.18
Brf1Q8CFK2 Gm9544-201ENSMUST00000223349 2482 ntBASIC13.93□□□□□ -0.18
Brf1Q8CFK2 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brf1Q8CFK2 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Brf1Q8CFK2 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brf1Q8CFK2 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Brf1Q8CFK2 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Brf1Q8CFK2 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Brf1Q8CFK2 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Brf1Q8CFK2 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms