Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Gm7722-201ENSMUST00000120646 741 ntBASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Gm2546-201ENSMUST00000182630 991 ntBASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ccdc28bQ8CEG5 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ccdc28bQ8CEG5 Slc10a7-202ENSMUST00000209490 3485 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Gm10434-201ENSMUST00000101158 471 ntBASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Gm12490-201ENSMUST00000120255 560 ntBASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Gm42627-201ENSMUST00000197347 224 ntBASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Fbrs-201ENSMUST00000048896 2650 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ccdc28bQ8CEG5 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Impa1-202ENSMUST00000118410 2988 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Mir1247-201ENSMUST00000116706 82 ntBASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Ccdc28bQ8CEG5 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms